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Computational Models

v-mango

Computational Models

A new virtual modeling environment for plant models

The use of Jupyter notebooks makes model creation and execution more accessible.

Rachel Shekar · 25 Jan 2022

Barley seed

Computational Models

Measuring the hidden phenotype using novel mathematical techniques

A new study quantifies the shape of barley seeds using topological methods.

Rachel Shekar · 6 Jan 2022

Barley seed

Computational Models

Midiendo el fenotipo oculto con técnicas matemáticas novedosas

Un nuevo estudio cuantifica la forma de las semillas de cebada utilizando métodos topológicos.

Rachel Shekar · 6 Jan 2022

grass blades

Cells, Genes & Molecules

Simulating grass phenotypic plasticity as an emergent property

Integrating plant functioning at organ scale can simulate the phenotypic plasticity of plants.

Rachel Shekar · 4 Jan 2022

Botanists take a step back to move forward in understanding grass

Computational Models

Botanists take a step back to move forward in understanding grass

A 19th century idea of how grass grows has proven more accurate than later ideas, according to new research.

Alun Salt · 9 Dec 2021

Two carbohydrate models

Computational Models

Improving wine yield and quality by improving carbohydrate modelling

A new study compares the accuracy of carbohydrate allocation and transport models for grapevine.

Rachel Shekar · 2 Dec 2021

light rays

Computational Models

1D light models as accurate are as 3D at estimating dry matter

Researchers compare trade-offs between simplicity and accuracy when modelling greenhouse cucumber canopies.

Rachel Shekar · 30 Nov 2021

Principles of resilient coding for plant ecophysiologists

Computational Models

Principles of resilient coding for plant ecophysiologists

Tired: Remembering if ‘ACi_sol_C_1.xlsx’ or ‘ACi_sol_D_v3.xlsx’ has correct parameter estimates. Wired: Using reproducible, scalable code to analyse data.

William Salter · 25 Nov 2021

primary and secondary vein patterning in dicot leaves

Cells, Genes & Molecules

Plant computational model explains how leaf veins develop

Polar auxin transport dynamics control vein patterning.

Rachel Shekar · 18 Nov 2021

Sampling forests with terrestrial laser scanning

Computational Models

Sampling forests with terrestrial laser scanning

Terrestrial laser scanners (TLSs) have successfully captured various properties of individual trees and have potential to further increase the quality and efficiency of forest surveys. However,

botanyone · 9 Nov 2021

Forest above-ground volume assessments with terrestrial laser scanning: a ground-truth validation experiment in temperate, managed forests

Computational Models

Forest above-ground volume assessments with terrestrial laser scanning: a ground-truth validation experiment in temperate, managed forests

Quantifying the Earth’s forest above-ground biomass (AGB) is indispensable for effective climate action and developing forest policy. Yet, current allometric scaling models (ASMs) to

botanyone · 8 Nov 2021

Four European beech tree 3D representations reconstructed from TLS data point clouds

Computational Models

Reconstructing trees from terrestrial laser scans

A new algorithm supports the detailed reconstruction of a variety of trees from a small amount of input data.

Rachel Shekar · 25 Oct 2021

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