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Computational Models

Autonomous construction of 3D leaves

Computational Models

Autonomous construction of 3D leaves

An assessment of deep generative networks in creating realistic 3D data

Rachel Shekar · 8 Sep 2022

Machine learning used to identify transcription factor-DNA interactions

Cells, Genes & Molecules

Machine learning used to identify transcription factor-DNA interactions

Surveying machine learning methods to improve detection of binding sites.

Rachel Shekar · 5 Sep 2022

Modelling perennial grass phenology

Computational Models

Modelling perennial grass phenology

Predicting phenology can provide insight into better management.

Rachel Shekar · 31 Aug 2022

Increased soybean yields finally achieved

Cells, Genes & Molecules

Increased soybean yields finally achieved

Bioengineering boosts photosynthesis and increases yields in food crops for the first time ever.

Rachel Shekar · 18 Aug 2022

Connecting rhythmic gene circuits to metabolism explains the slow growth rate of a slow-clock mutant

Cells, Genes & Molecules

Connecting rhythmic gene circuits to metabolism explains the slow growth rate of a slow-clock mutant

A model designed to study circadian effects on physiology becomes more broadly useful when the clock regulates metabolites.

Rachel Shekar · 10 Aug 2022

A flow diagram with three horizontal levels. The bottom level is causal genetic loci listing 4 genes for each intermediate tr

Cells, Genes & Molecules

The benefits of a network view of selection response for complex traits

A new gene-to-phenotype network for shoot branching.

Rachel Shekar · 28 Jul 2022

A graphic of experimental field setup shows a fan blowing wind across four maize plants. Each plant has 5 target points highl

Computational Models

Video-based measurements of maize stalk movement

Measuring the impact of brace roots on lodging resistance in maize.

Rachel Shekar · 14 Jul 2022

Using models to optimize planting density

Computational Models

Using models to optimize planting density

The closeness of plants affects architectural plasticity and carbon uptake.

Rachel Shekar · 11 Jul 2022

cotton plant with dried leaves

Cells, Genes & Molecules

Unraveling the mechanisms of producing high quality cotton

A new study uses computational modelling to determine how and why cotton quality develops.

Rachel Shekar · 17 Jun 2022

Connecting plant phenotyping and modelling communities

Computational Models

Connecting plant phenotyping and modelling communities

A new study highlights areas of compatibility and strategies to move towards better communication and collaboration.

Rachel Shekar · 15 Jun 2022

Find and compare the different tools available for your research in plant science

Computational Models

Find and compare the different tools available for your research in plant science

The Quantitative Plant website is a comprehensive database of public datasets for plant phenotyping, image analysis software tools and models for plants.

Rachel Shekar · 31 May 2022

Modular models allow users to focus on biology rather than programming

Cells, Genes & Molecules

Modular models allow users to focus on biology rather than programming

Presenting BioCro II: an updated software package for modular crop growth simulations.

Rachel Shekar · 18 May 2022

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