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in silico Plants

Simulating red:far red ratio in your model

Cells, Genes & Molecules

Simulating red:far red ratio in your model

The best method depends on your goal, need for accuracy, and computing allowance

Rachel Shekar · 14 Sep 2022

MARSHAL, a novel tool for modeling root system hydraulics

in silico Plants

MARSHAL, a novel tool for modeling root system hydraulics

A new computational tool couples a root architecture model with fast and accurate algorithms of water flow through hydraulic architectures and plant-scale parameter calculations.

Rachel Shekar · 21 Nov 2019

How do you combine simplicity and realism in plant models?

in silico Plants

How do you combine simplicity and realism in plant models?

Parsimony and biological reality are often seen as antagonistic goals in plant modelling. Hammer and colleagues argue that isn’t always the case, and combining the two approaches could bring benefits to scientists as well as plants.

Rachel Shekar · 19 Nov 2019

Ivy leaf

in silico Plants

Modelling molecular-level processes using parametric extension of L-systems

It is now possible to simulate molecular and higher-level spatially explicit stochastic processes and study their behavior in the presence of stochastic perturbations

Rachel Shekar · 13 Nov 2019

We asked the members of the in silico Plants editorial board what they do to achieve work/life balance.

featured

We asked the members of the in silico Plants editorial board what they do to achieve work/life balance.

This is what they said:

Rachel Shekar · 1 Nov 2019

What experience has had the biggest impact on your career? (Part Two)

featured

What experience has had the biggest impact on your career? (Part Two)

We asked the members of the in silico Plants editorial board about the experience that has had the biggest impact on their career. This is what

Rachel Shekar · 20 Aug 2019

What is the best conference or workshop you ever attended? Are there any upcoming conferences or workshops that you are looking forward to?

in silico Plants

What is the best conference or workshop you ever attended? Are there any upcoming conferences or workshops that you are looking forward to?

We asked the members of the in silico Plants editorial board about which conferences they had found useful, or were looking forward to. This is what

Rachel Shekar · 14 Aug 2019

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in silico Plants

Scaling photosynthesis from gene to leaf

Scientists combine models to create a powerful multiscale model that can identify key transcription factors regulating leaf photosynthesis.

Rachel Shekar · 24 Jun 2019

What experience has had the biggest impact on your career?

featured

What experience has had the biggest impact on your career?

We asked the members of the in silico Plants editorial board about the experience that has had the biggest impact on their career. This is what

Rachel Shekar · 21 Jun 2019

Grapes on a vine

in silico Plants

HydroShoot: a functional-structural plant model for simulating hydraulic structure, gas and energy exchange dynamics

A new model is able to predict the effect of training systems on grapevine gas-exchange dynamics under drought.

Rachel Shekar · 18 Jun 2019

A diagram

in silico Plants

Dynamic modeling of the iron deficiency in plants

Scientists unravel the mysteries of the iron deficiency-induced transcriptional response in plants using a dynamic model.

Rachel Shekar · 13 Jun 2019

alt text

in silico Plants

Maize Reproductive Failure under Drought Quantified

Reproductive failure in maize has long been studied in plant science. Now, for the first time, it has been quantitatively synthesized.

Rachel Shekar · 6 Jun 2019

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